Carnation DB

Dca18442.1

Annotation

5-exons
f-1
sp|B9HNQ6_POPTR#tRNA-dihydrouridine synthase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557785#GO:0050660;GO:0017150;GO:0008033#2F1P0C
Repeat List (scaffold1953)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18442.1	48	201	201	65.17	154	86	2e-76
Target_name	Start	End	Length	Cov(%)
sp\|B9HNQ6_POPTR	1	154	380	40.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18442.1	55	201	201	59.7	147	82	5e-71
Target_name	Start	End	Length	Cov(%)
Os04t0278900-01	62	208	258	56.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1953	Augustus	mRNA	115	1149	.	-	.	ID=Dca18442.1;Parent=Dca18442
scaffold1953	Augustus	exon	115	217	.	-	.	ID=Dca18442.1.exon1;Parent=Dca18442.1
scaffold1953	Augustus	exon	340	409	.	-	.	ID=Dca18442.1.exon2;Parent=Dca18442.1
scaffold1953	Augustus	exon	515	642	.	-	.	ID=Dca18442.1.exon3;Parent=Dca18442.1
scaffold1953	Augustus	exon	755	881	.	-	.	ID=Dca18442.1.exon4;Parent=Dca18442.1
scaffold1953	Augustus	exon	974	1149	.	-	.	ID=Dca18442.1.exon5;Parent=Dca18442.1