Carnation DB

Dca18522.1

Annotation

10-exons
f-1
sp|B9S762_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1334240#unknown#0F0P0C
sp|G7JP72_MEDTR#Ran-binding protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g032800#unknown#0F0P0C
Repeat List (scaffold196)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18522.1	37	450	453	57.61	414	64	8e-158
Target_name	Start	End	Length	Cov(%)
sp\|B9S762_RICCO	68	481	487	85.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18522.1	7	450	453	56.95	444	58	1e-150
Target_name	Start	End	Length	Cov(%)
AT1G35470.2	23	465	467	94.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold196	Augustus	mRNA	94876	98662	.	-	.	ID=Dca18522.1;Parent=Dca18522
scaffold196	Augustus	exon	94876	95148	.	-	.	ID=Dca18522.1.exon1;Parent=Dca18522.1
scaffold196	Augustus	exon	95271	95357	.	-	.	ID=Dca18522.1.exon2;Parent=Dca18522.1
scaffold196	Augustus	exon	95599	95658	.	-	.	ID=Dca18522.1.exon3;Parent=Dca18522.1
scaffold196	Augustus	exon	95757	95825	.	-	.	ID=Dca18522.1.exon4;Parent=Dca18522.1
scaffold196	Augustus	exon	96304	96466	.	-	.	ID=Dca18522.1.exon5;Parent=Dca18522.1
scaffold196	Augustus	exon	96564	96640	.	-	.	ID=Dca18522.1.exon6;Parent=Dca18522.1
scaffold196	Augustus	exon	96777	96822	.	-	.	ID=Dca18522.1.exon7;Parent=Dca18522.1
scaffold196	Augustus	exon	97049	97135	.	-	.	ID=Dca18522.1.exon8;Parent=Dca18522.1
scaffold196	Augustus	exon	97354	97500	.	-	.	ID=Dca18522.1.exon9;Parent=Dca18522.1
scaffold196	Augus-PASA	exon	98310	98662	.	-	.	ID=Dca18522.1.exon10;Parent=Dca18522.1
scaffold196	Augustus	mRNA	94876	98662	.	-	.	ID=Dca18522.2;Parent=Dca18522
scaffold196	Augustus	exon	94876	95148	.	-	.	ID=Dca18522.2.exon1;Parent=Dca18522.2
scaffold196	Augustus	exon	95271	95357	.	-	.	ID=Dca18522.2.exon2;Parent=Dca18522.2
scaffold196	Augustus	exon	95599	95658	.	-	.	ID=Dca18522.2.exon3;Parent=Dca18522.2
scaffold196	Augustus	exon	95757	95825	.	-	.	ID=Dca18522.2.exon4;Parent=Dca18522.2
scaffold196	Augustus	exon	96304	96466	.	-	.	ID=Dca18522.2.exon5;Parent=Dca18522.2
scaffold196	Augustus	exon	97354	97500	.	-	.	ID=Dca18522.2.exon6;Parent=Dca18522.2
scaffold196	Augus-PASA	exon	98310	98662	.	-	.	ID=Dca18522.2.exon7;Parent=Dca18522.2