Carnation DB

Dca18535.1

Annotation

7-exons
f-1
sp|C6SYF0_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0008270#1F0P0C
sp|G7J069_MEDTR#RING finger protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g005800#GO:0008270#1F0P0C
Repeat List (scaffold196)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18535.1	4	186	244	43.85	183	59	1e-62
Target_name	Start	End	Length	Cov(%)
sp\|C6SYF0_SOYBN	3	185	186	98.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18535.1	6	186	244	37.29	181	51	4e-55
Target_name	Start	End	Length	Cov(%)
Os03t0839000-01	10	190	192	94.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold196	Augus-PASA	mRNA	192496	195358	.	+	.	ID=Dca18535.1;Parent=Dca18535
scaffold196	Augus-PASA	exon	192496	192592	.	+	.	ID=Dca18535.1.exon1;Parent=Dca18535.1
scaffold196	Augus-PASA	exon	193290	193489	.	+	.	ID=Dca18535.1.exon2;Parent=Dca18535.1
scaffold196	Augus-PASA	exon	193657	193758	.	+	.	ID=Dca18535.1.exon3;Parent=Dca18535.1
scaffold196	Augus-PASA	exon	193849	193900	.	+	.	ID=Dca18535.1.exon4;Parent=Dca18535.1
scaffold196	Augustus	exon	194002	194130	.	+	.	ID=Dca18535.1.exon5;Parent=Dca18535.1
scaffold196	Augustus	exon	194921	195004	.	+	.	ID=Dca18535.1.exon6;Parent=Dca18535.1
scaffold196	Augustus	exon	195288	195358	.	+	.	ID=Dca18535.1.exon7;Parent=Dca18535.1