Dca18541.1
Annotation
- 4-exons
- f-1
- sp|B9IIG9_POPTR#White-brown-complex ABC transporter family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825159#GO:0005524;GO:0016887#2F0P0C
- Repeat List (scaffold196)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18541.1 |
1 |
66 |
202 |
22.77 |
66 |
69 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IIG9_POPTR |
164 |
230 |
744 |
9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18541.1 |
2 |
66 |
202 |
21.78 |
65 |
68 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G06530.2 |
173 |
237 |
751 |
8.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold196 |
Augustus |
mRNA |
229341 |
233831 |
. |
- |
. |
ID=Dca18541.1;Parent=Dca18541 |
| scaffold196 |
Augustus |
exon |
229341 |
229445 |
. |
- |
. |
ID=Dca18541.1.exon1;Parent=Dca18541.1 |
| scaffold196 |
Augustus |
exon |
231092 |
231199 |
. |
- |
. |
ID=Dca18541.1.exon2;Parent=Dca18541.1 |
| scaffold196 |
Augustus |
exon |
233144 |
233304 |
. |
- |
. |
ID=Dca18541.1.exon3;Parent=Dca18541.1 |
| scaffold196 |
Augustus |
exon |
233597 |
233831 |
. |
- |
. |
ID=Dca18541.1.exon4;Parent=Dca18541.1 |
