Dca18563.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1962)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18563.1 |
2 |
546 |
563 |
49.37 |
545 |
48 |
3e-150
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
108 |
692 |
1501 |
38.97 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18563.1 |
224 |
545 |
563 |
20.78 |
322 |
36 |
5e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
380 |
707 |
46.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1962 |
Augustus |
mRNA |
6107 |
10464 |
. |
- |
. |
ID=Dca18563.1;Parent=Dca18563 |
| scaffold1962 |
Augustus |
exon |
6107 |
6163 |
. |
- |
. |
ID=Dca18563.1.exon1;Parent=Dca18563.1 |
| scaffold1962 |
Augustus |
exon |
8830 |
10464 |
. |
- |
. |
ID=Dca18563.1.exon2;Parent=Dca18563.1 |
