Dca18578.1
Annotation
- 4-exons
- f-1
- sp|A5BNR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_035665#GO:0003676;GO:0000166;GO:0016491;GO:0008270;GO:0015074#4F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1963)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18578.1 |
80 |
1518 |
1599 |
35.45 |
1439 |
37 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BNR5_VITVI |
281 |
1721 |
1813 |
79.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18578.1 |
650 |
1505 |
1599 |
19.69 |
856 |
34 |
6e-138
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
478 |
1378 |
1401 |
64.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1963 |
Augustus |
mRNA |
20875 |
26144 |
. |
- |
. |
ID=Dca18578.1;Parent=Dca18578 |
| scaffold1963 |
Augustus |
exon |
20875 |
21864 |
. |
- |
. |
ID=Dca18578.1.exon1;Parent=Dca18578.1 |
| scaffold1963 |
Augustus |
exon |
22036 |
25604 |
. |
- |
. |
ID=Dca18578.1.exon2;Parent=Dca18578.1 |
| scaffold1963 |
Augustus |
exon |
25786 |
25826 |
. |
- |
. |
ID=Dca18578.1.exon3;Parent=Dca18578.1 |
| scaffold1963 |
Augustus |
exon |
25945 |
26144 |
. |
- |
. |
ID=Dca18578.1.exon4;Parent=Dca18578.1 |
