Carnation DB

Dca18582.1

Annotation

9-exons
f-1
sp|F6HT89_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g01340#GO:0004221;GO:0006511#1F1P0C
sp|G7KF27_MEDTR#Ubiquitin carboxyl-terminal hydrolase#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g030360#GO:0004221;GO:0006511#1F1P0C
Repeat List (scaffold1963)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18582.1	117	622	624	40.38	506	48	2e-109
Target_name	Start	End	Length	Cov(%)
sp\|F6HT89_VITVI	5	521	525	98.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18582.1	10	408	624	29.48	399	46	1e-93
Target_name	Start	End	Length	Cov(%)
AT4G17895.1	152	509	695	51.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1963	Augustus	mRNA	93995	97729	.	-	.	ID=Dca18582.1;Parent=Dca18582
scaffold1963	Augustus	exon	93995	94305	.	-	.	ID=Dca18582.1.exon1;Parent=Dca18582.1
scaffold1963	Augustus	exon	94486	94987	.	-	.	ID=Dca18582.1.exon2;Parent=Dca18582.1
scaffold1963	Augustus	exon	95119	95241	.	-	.	ID=Dca18582.1.exon3;Parent=Dca18582.1
scaffold1963	Augustus	exon	95465	95794	.	-	.	ID=Dca18582.1.exon4;Parent=Dca18582.1
scaffold1963	Augustus	exon	95945	96093	.	-	.	ID=Dca18582.1.exon5;Parent=Dca18582.1
scaffold1963	Augustus	exon	96502	96609	.	-	.	ID=Dca18582.1.exon6;Parent=Dca18582.1
scaffold1963	Augustus	exon	97167	97274	.	-	.	ID=Dca18582.1.exon7;Parent=Dca18582.1
scaffold1963	Augustus	exon	97376	97496	.	-	.	ID=Dca18582.1.exon8;Parent=Dca18582.1
scaffold1963	Augustus	exon	97607	97729	.	-	.	ID=Dca18582.1.exon9;Parent=Dca18582.1