Dca18596.1
Annotation
- 4-exons
- f-1
- sp|D7L5T1_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_479998#GO:0008270#1F0P0C
- AT3G24800.1 | Symbols: PRT1 | proteolysis 1 | chr3:9055653-9057795 FORWARD LENGTH=410
- Repeat List (scaffold19648)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18596.1 |
7 |
202 |
238 |
39.91 |
196 |
44 |
4e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L5T1_ARALL |
9 |
215 |
417 |
49.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18596.1 |
7 |
202 |
238 |
40.33 |
196 |
45 |
8e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24800.1 |
9 |
209 |
410 |
49.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19648 |
Augustus |
mRNA |
335 |
2494 |
. |
+ |
. |
ID=Dca18596.1;Parent=Dca18596 |
| scaffold19648 |
Augustus |
exon |
335 |
417 |
. |
+ |
. |
ID=Dca18596.1.exon1;Parent=Dca18596.1 |
| scaffold19648 |
Augustus |
exon |
994 |
1022 |
. |
+ |
. |
ID=Dca18596.1.exon2;Parent=Dca18596.1 |
| scaffold19648 |
Augustus |
exon |
1122 |
1301 |
. |
+ |
. |
ID=Dca18596.1.exon3;Parent=Dca18596.1 |
| scaffold19648 |
Augustus |
exon |
2070 |
2494 |
. |
+ |
. |
ID=Dca18596.1.exon4;Parent=Dca18596.1 |
