Dca18616.1
Annotation
- 4-exons
- f-1
- sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold1966)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18616.1 |
6 |
447 |
487 |
55.64 |
442 |
55 |
4e-144
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AUE6_VITVI |
403 |
886 |
2026 |
23.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18616.1 |
2 |
475 |
487 |
34.7 |
474 |
32 |
9e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
672 |
1191 |
1401 |
37.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1966 |
Augustus |
mRNA |
44780 |
46545 |
. |
+ |
. |
ID=Dca18616.1;Parent=Dca18616 |
| scaffold1966 |
Augustus |
exon |
44780 |
45852 |
. |
+ |
. |
ID=Dca18616.1.exon1;Parent=Dca18616.1 |
| scaffold1966 |
Augustus |
exon |
45992 |
46258 |
. |
+ |
. |
ID=Dca18616.1.exon2;Parent=Dca18616.1 |
| scaffold1966 |
Augustus |
exon |
46342 |
46408 |
. |
+ |
. |
ID=Dca18616.1.exon3;Parent=Dca18616.1 |
| scaffold1966 |
Augustus |
exon |
46489 |
46545 |
. |
+ |
. |
ID=Dca18616.1.exon4;Parent=Dca18616.1 |
