Carnation DB

Dca18625.1

Annotation

7-exons
f-1
sp|F6HPK6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0026g00690#GO:0003676;GO:0004523#2F0P0C
AT1G24090.1 | Symbols: | RNase H family protein | chr1:8520834-8522737 FORWARD LENGTH=353
Repeat List (scaffold1967)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18625.1	2	239	261	59.38	238	56	1e-75
Target_name	Start	End	Length	Cov(%)
sp\|F6HPK6_VITVI	29	306	331	83.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18625.1	6	238	261	52.87	233	52	2e-69
Target_name	Start	End	Length	Cov(%)
AT1G24090.1	78	345	353	75.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1967	Augus-PASA	mRNA	31755	34625	.	+	.	ID=Dca18625.1;Parent=Dca18625
scaffold1967	Augus-PASA	exon	31755	31865	.	+	.	ID=Dca18625.1.exon1;Parent=Dca18625.1
scaffold1967	Augus-PASA	exon	32601	32759	.	+	.	ID=Dca18625.1.exon2;Parent=Dca18625.1
scaffold1967	Augustus	exon	32940	33020	.	+	.	ID=Dca18625.1.exon3;Parent=Dca18625.1
scaffold1967	Augustus	exon	33302	33379	.	+	.	ID=Dca18625.1.exon4;Parent=Dca18625.1
scaffold1967	Augustus	exon	33462	33554	.	+	.	ID=Dca18625.1.exon5;Parent=Dca18625.1
scaffold1967	Augustus	exon	33660	33803	.	+	.	ID=Dca18625.1.exon6;Parent=Dca18625.1
scaffold1967	Augustus	exon	34506	34625	.	+	.	ID=Dca18625.1.exon7;Parent=Dca18625.1