Dca18657.1
Annotation
- 3-exons
- f-3
- sp|A9PAB7_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
- Os03t0766000-01 Similar to seven transmembrane domain protein.
- Repeat List (scaffold19692)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18657.1 |
13 |
106 |
107 |
71.96 |
94 |
82 |
6e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PAB7_POPTR |
134 |
227 |
228 |
41.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18657.1 |
13 |
105 |
107 |
65.42 |
93 |
76 |
7e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0766000-01 |
134 |
226 |
228 |
40.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold19692 |
Augustus |
mRNA |
155 |
987 |
. |
+ |
. |
ID=Dca18657.1;Parent=Dca18657 |
| scaffold19692 |
Augustus |
exon |
155 |
231 |
. |
+ |
. |
ID=Dca18657.1.exon1;Parent=Dca18657.1 |
| scaffold19692 |
Augustus |
exon |
304 |
428 |
. |
+ |
. |
ID=Dca18657.1.exon2;Parent=Dca18657.1 |
| scaffold19692 |
Augustus |
exon |
864 |
987 |
. |
+ |
. |
ID=Dca18657.1.exon3;Parent=Dca18657.1 |
