Dca18680.1
Annotation
- 4-exons
- f-1
- sp|B9H7L8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818560#unknown#0F0P0C
- AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein | chr1:7497479-7499386 FORWARD LENGTH=360
- Repeat List (scaffold197)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18680.1 |
8 |
366 |
366 |
72.95 |
359 |
75 |
3e-157
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H7L8_POPTR |
8 |
360 |
363 |
97.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18680.1 |
11 |
366 |
366 |
67.48 |
356 |
70 |
9e-148
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21410.1 |
10 |
357 |
360 |
96.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold197 |
Augus-PASA |
mRNA |
141787 |
144028 |
. |
- |
. |
ID=Dca18680.1;Parent=Dca18680 |
| scaffold197 |
Augus-PASA |
exon |
141787 |
142151 |
. |
- |
. |
ID=Dca18680.1.exon1;Parent=Dca18680.1 |
| scaffold197 |
Augus-PASA |
exon |
142494 |
142635 |
. |
- |
. |
ID=Dca18680.1.exon2;Parent=Dca18680.1 |
| scaffold197 |
Augus-PASA |
exon |
142720 |
143068 |
. |
- |
. |
ID=Dca18680.1.exon3;Parent=Dca18680.1 |
| scaffold197 |
Augustus |
exon |
143784 |
144028 |
. |
- |
. |
ID=Dca18680.1.exon4;Parent=Dca18680.1 |
