Carnation DB

Dca18682.1

Annotation

9-exons
f-1
sp|E0CQJ8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14980#GO:0016624#1F0P0C
AT5G09300.1 | Symbols: | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr5:2884282-2886797 REVERSE LENGTH=472
Repeat List (scaffold197)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18682.1	13	435	438	64.84	423	68	1e-176
Target_name	Start	End	Length	Cov(%)
sp\|E0CQJ8_VITVI	52	468	471	88.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18682.1	38	438	438	61.87	401	68	6e-171
Target_name	Start	End	Length	Cov(%)
AT5G09300.1	71	472	472	85.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold197	Augus-PASA	mRNA	167825	173071	.	-	.	ID=Dca18682.1;Parent=Dca18682
scaffold197	Augus-PASA	exon	167825	167992	.	-	.	ID=Dca18682.1.exon1;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	168086	168271	.	-	.	ID=Dca18682.1.exon2;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	168357	168496	.	-	.	ID=Dca18682.1.exon3;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	168581	168692	.	-	.	ID=Dca18682.1.exon4;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	168772	168871	.	-	.	ID=Dca18682.1.exon5;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	168960	169117	.	-	.	ID=Dca18682.1.exon6;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	169229	169411	.	-	.	ID=Dca18682.1.exon7;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	169523	169660	.	-	.	ID=Dca18682.1.exon8;Parent=Dca18682.1
scaffold197	Augus-PASA	exon	172940	173071	.	-	.	ID=Dca18682.1.exon9;Parent=Dca18682.1