Carnation DB

Dca187.1

Annotation

9-exons
f-1
sp|B9HP72_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_804519#GO:0004553;GO:0005975#1F1P0C
AT3G47000.1 | Symbols: | Glycosyl hydrolase family protein | chr3:17313811-17316539 REVERSE LENGTH=608
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca187.1	5	594	597	74.53	590	74	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HP72_POPTR	6	601	603	98.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca187.1	5	590	597	70.18	586	70	0
Target_name	Start	End	Length	Cov(%)
AT3G47000.1	8	606	608	98.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augus-PASA	mRNA	449925	453956	.	-	.	ID=Dca187.1;Parent=Dca187
scaffold10	Augus-PASA	exon	449925	450421	.	-	.	ID=Dca187.1.exon1;Parent=Dca187.1
scaffold10	Augus-PASA	exon	450566	450767	.	-	.	ID=Dca187.1.exon2;Parent=Dca187.1
scaffold10	Augustus	exon	450928	451074	.	-	.	ID=Dca187.1.exon3;Parent=Dca187.1
scaffold10	Augustus	exon	451196	451300	.	-	.	ID=Dca187.1.exon4;Parent=Dca187.1
scaffold10	Augustus	exon	451537	451780	.	-	.	ID=Dca187.1.exon5;Parent=Dca187.1
scaffold10	Augustus	exon	451870	452015	.	-	.	ID=Dca187.1.exon6;Parent=Dca187.1
scaffold10	Augustus	exon	452600	452690	.	-	.	ID=Dca187.1.exon7;Parent=Dca187.1
scaffold10	Augustus	exon	452772	452976	.	-	.	ID=Dca187.1.exon8;Parent=Dca187.1
scaffold10	Augustus	exon	453800	453956	.	-	.	ID=Dca187.1.exon9;Parent=Dca187.1