Carnation DB

Dca18723.1

Annotation

5-exons
f-1
sp|B9HJR8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721090#unknown#0F0P0C
sp|G7LFG2_MEDTR#LSM12-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_8g063230#unknown#0F0P0C
Repeat List (scaffold1972)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18723.1	11	169	175	68.57	159	76	1e-68
Target_name	Start	End	Length	Cov(%)
sp\|B9HJR8_POPTR	18	176	189	84.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18723.1	11	168	175	60	158	66	2e-58
Target_name	Start	End	Length	Cov(%)
Os02t0741900-01	6	166	182	88.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1972	Augus-PASA	mRNA	24184	26996	.	+	.	ID=Dca18723.1;Parent=Dca18723
scaffold1972	Augus-PASA	exon	24184	24319	.	+	.	ID=Dca18723.1.exon1;Parent=Dca18723.1
scaffold1972	Augus-PASA	exon	24475	24634	.	+	.	ID=Dca18723.1.exon2;Parent=Dca18723.1
scaffold1972	Augus-PASA	exon	24825	24905	.	+	.	ID=Dca18723.1.exon3;Parent=Dca18723.1
scaffold1972	Augus-PASA	exon	26749	26872	.	+	.	ID=Dca18723.1.exon4;Parent=Dca18723.1
scaffold1972	Augus-PASA	exon	26970	26996	.	+	.	ID=Dca18723.1.exon5;Parent=Dca18723.1