Carnation DB

Dca18755.1

Annotation

10-exons
f-310
sp|B9GFL2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_550198#GO:0005694;GO:0005524;GO:0003824;GO:0003677#3F0P1C
AT3G13170.1 | Symbols: ATSPO11-1 | Spo11/DNA topoisomerase VI, subunit A protein | chr3:4231560-4234192 REVERSE LENGTH=362
Repeat List (scaffold1975)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18755.1	1	117	121	64.46	117	48	2e-31
Target_name	Start	End	Length	Cov(%)
sp\|B9GFL2_POPTR	141	303	365	44.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18755.1	1	117	121	61.98	117	46	4e-29
Target_name	Start	End	Length	Cov(%)
AT3G13170.1	144	306	362	45.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1975	Augustus	mRNA	99972	103787	.	+	.	ID=Dca18755.1;Parent=Dca18755
scaffold1975	Augustus	exon	99972	100026	.	+	.	ID=Dca18755.1.exon1;Parent=Dca18755.1
scaffold1975	Augustus	exon	100136	100235	.	+	.	ID=Dca18755.1.exon2;Parent=Dca18755.1
scaffold1975	Augustus	exon	101127	101229	.	+	.	ID=Dca18755.1.exon3;Parent=Dca18755.1
scaffold1975	Augustus	exon	101910	101953	.	+	.	ID=Dca18755.1.exon4;Parent=Dca18755.1
scaffold1975	Augustus	exon	102272	102321	.	+	.	ID=Dca18755.1.exon5;Parent=Dca18755.1
scaffold1975	Augustus	exon	102789	102847	.	+	.	ID=Dca18755.1.exon6;Parent=Dca18755.1
scaffold1975	Augustus	exon	102920	102951	.	+	.	ID=Dca18755.1.exon7;Parent=Dca18755.1
scaffold1975	Augustus	exon	103071	103176	.	+	.	ID=Dca18755.1.exon8;Parent=Dca18755.1
scaffold1975	Augustus	exon	103533	103620	.	+	.	ID=Dca18755.1.exon9;Parent=Dca18755.1
scaffold1975	Augustus	exon	103750	103787	.	+	.	ID=Dca18755.1.exon10;Parent=Dca18755.1