Carnation DB

Dca18803.1

Annotation

10-exons
f-1
sp|F6I369_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g00960#unknown#0F0P0C
sp|B9RDD1_RICCO#Nucleotide binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1612160#unknown#0F0P0C
Repeat List (scaffold198)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18803.1	1	436	440	69.77	436	71	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I369_VITVI	1	435	439	99.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18803.1	1	439	440	66.59	439	67	4e-174
Target_name	Start	End	Length	Cov(%)
AT4G00090.1	1	429	430	99.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold198	Augus-PASA	mRNA	77093	80788	.	+	.	ID=Dca18803.1;Parent=Dca18803
scaffold198	Augus-PASA	exon	77093	77311	.	+	.	ID=Dca18803.1.exon1;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	77427	77532	.	+	.	ID=Dca18803.1.exon2;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	78206	78266	.	+	.	ID=Dca18803.1.exon3;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	78343	78638	.	+	.	ID=Dca18803.1.exon4;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	78959	79098	.	+	.	ID=Dca18803.1.exon5;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	79234	79308	.	+	.	ID=Dca18803.1.exon6;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	79799	79889	.	+	.	ID=Dca18803.1.exon7;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	79996	80199	.	+	.	ID=Dca18803.1.exon8;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	80554	80598	.	+	.	ID=Dca18803.1.exon9;Parent=Dca18803.1
scaffold198	Augus-PASA	exon	80703	80788	.	+	.	ID=Dca18803.1.exon10;Parent=Dca18803.1