Carnation DB

Dca18827.1

Annotation

8-exons
f-1
sp|B9ST35_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0353910#unknown#0F0P0C
AT1G29700.1 | Symbols: | Metallo-hydrolase/oxidoreductase superfamily protein | chr1:10385196-10386906 REVERSE LENGTH=350
Repeat List (scaffold1980)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18827.1	5	338	339	67.84	334	68	2e-124
Target_name	Start	End	Length	Cov(%)
sp\|B9ST35_RICCO	3	333	336	98.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18827.1	5	338	339	62.24	334	63	5e-118
Target_name	Start	End	Length	Cov(%)
AT1G29700.1	15	343	350	94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1980	Augus-PASA	mRNA	6646	12387	.	+	.	ID=Dca18827.1;Parent=Dca18827
scaffold1980	Augus-PASA	exon	6646	6815	.	+	.	ID=Dca18827.1.exon1;Parent=Dca18827.1
scaffold1980	Augus-PASA	exon	7327	7417	.	+	.	ID=Dca18827.1.exon2;Parent=Dca18827.1
scaffold1980	Augus-PASA	exon	8197	8322	.	+	.	ID=Dca18827.1.exon3;Parent=Dca18827.1
scaffold1980	Augus-PASA	exon	8429	8587	.	+	.	ID=Dca18827.1.exon4;Parent=Dca18827.1
scaffold1980	Augus-PASA	exon	11143	11261	.	+	.	ID=Dca18827.1.exon5;Parent=Dca18827.1
scaffold1980	Augus-PASA	exon	11506	11694	.	+	.	ID=Dca18827.1.exon6;Parent=Dca18827.1
scaffold1980	Augus-PASA	exon	11796	11886	.	+	.	ID=Dca18827.1.exon7;Parent=Dca18827.1
scaffold1980	Augus-PASA	exon	12313	12387	.	+	.	ID=Dca18827.1.exon8;Parent=Dca18827.1