Dca18847.1
Annotation
- 4-exons
- f-1
- sp|B9N9U1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_837548#unknown#0F0P0C
- AT5G28640.1 | Symbols: AN3, GIF, GIF1, ATGIF1 | SSXT family protein | chr5:10647831-10649620 REVERSE LENGTH=210
- Repeat List (scaffold1982)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18847.1 |
5 |
196 |
196 |
70.4 |
192 |
61 |
5e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N9U1_POPTR |
2 |
220 |
220 |
99.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18847.1 |
5 |
196 |
196 |
61.22 |
192 |
57 |
1e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G28640.1 |
2 |
210 |
210 |
99.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1982 |
Augus-PASA |
mRNA |
39923 |
44283 |
. |
- |
. |
ID=Dca18847.1;Parent=Dca18847 |
| scaffold1982 |
Augus-PASA |
exon |
39923 |
40261 |
. |
- |
. |
ID=Dca18847.1.exon1;Parent=Dca18847.1 |
| scaffold1982 |
Augus-PASA |
exon |
40352 |
40436 |
. |
- |
. |
ID=Dca18847.1.exon2;Parent=Dca18847.1 |
| scaffold1982 |
Augus-PASA |
exon |
40568 |
40644 |
. |
- |
. |
ID=Dca18847.1.exon3;Parent=Dca18847.1 |
| scaffold1982 |
Augus-PASA |
exon |
44194 |
44283 |
. |
- |
. |
ID=Dca18847.1.exon4;Parent=Dca18847.1 |
