Carnation DB

Dca18904.1

Annotation

7-exons
f-1
sp|B9N9M7_POPTR#D-tyrosyl-tRNA(Tyr) deacylase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828633#GO:0005737;GO:0016788;GO:0019478#1F1P1C
Repeat List (scaffold1987)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18904.1	26	195	195	68.2	170	76	1e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9N9M7_POPTR	16	190	201	87.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18904.1	43	195	195	61.02	153	78	9e-69
Target_name	Start	End	Length	Cov(%)
AT4G18460.1	1	153	153	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1987	Augus-PASA	mRNA	25573	27834	.	+	.	ID=Dca18904.1;Parent=Dca18904
scaffold1987	Augus-PASA	exon	25573	25740	.	+	.	ID=Dca18904.1.exon1;Parent=Dca18904.1
scaffold1987	Augus-PASA	exon	25848	25939	.	+	.	ID=Dca18904.1.exon2;Parent=Dca18904.1
scaffold1987	Augus-PASA	exon	26789	26855	.	+	.	ID=Dca18904.1.exon3;Parent=Dca18904.1
scaffold1987	Augus-PASA	exon	27017	27047	.	+	.	ID=Dca18904.1.exon4;Parent=Dca18904.1
scaffold1987	Augus-PASA	exon	27131	27271	.	+	.	ID=Dca18904.1.exon5;Parent=Dca18904.1
scaffold1987	Augus-PASA	exon	27604	27629	.	+	.	ID=Dca18904.1.exon6;Parent=Dca18904.1
scaffold1987	Augus-PASA	exon	27772	27834	.	+	.	ID=Dca18904.1.exon7;Parent=Dca18904.1