Carnation DB

Dca18905.1

Annotation

13-exons
f-1
sp|D7TJG8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g00630#unknown#0F0P0C
AT4G18470.1 | Symbols: SNI1 | negative regulator of systemic acquired resistance (SNI1) | chr4:10192984-10195511 FORWARD LENGTH=432
Repeat List (scaffold1987)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18905.1	6	414	416	46.63	409	47	1e-102
Target_name	Start	End	Length	Cov(%)
sp\|D7TJG8_VITVI	59	473	474	87.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18905.1	6	412	416	39.18	407	40	5e-72
Target_name	Start	End	Length	Cov(%)
AT4G18470.1	67	428	432	83.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1987	Augus-PASA	mRNA	28551	33210	.	-	.	ID=Dca18905.1;Parent=Dca18905
scaffold1987	Augus-PASA	exon	28551	28623	.	-	.	ID=Dca18905.1.exon1;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	28916	29046	.	-	.	ID=Dca18905.1.exon2;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	29284	29433	.	-	.	ID=Dca18905.1.exon3;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	30219	30284	.	-	.	ID=Dca18905.1.exon4;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	30492	30561	.	-	.	ID=Dca18905.1.exon5;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	30661	30731	.	-	.	ID=Dca18905.1.exon6;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	30817	31020	.	-	.	ID=Dca18905.1.exon7;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	31142	31191	.	-	.	ID=Dca18905.1.exon8;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	31271	31358	.	-	.	ID=Dca18905.1.exon9;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	31527	31592	.	-	.	ID=Dca18905.1.exon10;Parent=Dca18905.1
scaffold1987	Augus-PASA	exon	31937	32026	.	-	.	ID=Dca18905.1.exon11;Parent=Dca18905.1
scaffold1987	Augustus	exon	32110	32190	.	-	.	ID=Dca18905.1.exon12;Parent=Dca18905.1
scaffold1987	Augustus	exon	33100	33210	.	-	.	ID=Dca18905.1.exon13;Parent=Dca18905.1