Carnation DB

Dca18913.1

Annotation

6-exons
f-1
sp|A9PEQ8_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005634;GO:0003677;GO:0006355#1F1P1C
sp|B9RWI5_RICCO#Transcription factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1019810#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold1988)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18913.1	172	362	362	32.87	191	62	7e-54
Target_name	Start	End	Length	Cov(%)
sp\|A9PEQ8_POPTR	117	306	309	61.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18913.1	176	359	362	25.41	184	49	1e-34
Target_name	Start	End	Length	Cov(%)
AT4G13640.2	118	289	295	58.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1988	Augustus	mRNA	19231	21304	.	+	.	ID=Dca18913.1;Parent=Dca18913
scaffold1988	Augustus	exon	19231	19388	.	+	.	ID=Dca18913.1.exon1;Parent=Dca18913.1
scaffold1988	Augustus	exon	19879	19957	.	+	.	ID=Dca18913.1.exon2;Parent=Dca18913.1
scaffold1988	Augustus	exon	20102	20203	.	+	.	ID=Dca18913.1.exon3;Parent=Dca18913.1
scaffold1988	Augustus	exon	20340	20569	.	+	.	ID=Dca18913.1.exon4;Parent=Dca18913.1
scaffold1988	Augus-PASA	exon	20672	20741	.	+	.	ID=Dca18913.1.exon5;Parent=Dca18913.1
scaffold1988	Augus-PASA	exon	20855	21304	.	+	.	ID=Dca18913.1.exon6;Parent=Dca18913.1