Dca18915.1
Annotation
- 3-exons
- f-1
- sp|B9IJH8_POPTR#Ubiquitin carboxyl-terminal hydrolase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_778299#GO:0008234;GO:0004221;GO:0008270;GO:0006511#3F1P0C
- Repeat List (scaffold1988)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18915.1 |
1 |
836 |
838 |
45.7 |
836 |
42 |
1e-177
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IJH8_POPTR |
1 |
908 |
910 |
99.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18915.1 |
550 |
836 |
838 |
16.22 |
287 |
42 |
7e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G04860.1 |
638 |
957 |
961 |
33.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1988 |
Augustus |
mRNA |
31373 |
34090 |
. |
+ |
. |
ID=Dca18915.1;Parent=Dca18915 |
| scaffold1988 |
Augustus |
exon |
31373 |
33361 |
. |
+ |
. |
ID=Dca18915.1.exon1;Parent=Dca18915.1 |
| scaffold1988 |
Augustus |
exon |
33463 |
33737 |
. |
+ |
. |
ID=Dca18915.1.exon2;Parent=Dca18915.1 |
| scaffold1988 |
Augustus |
exon |
33838 |
34090 |
. |
+ |
. |
ID=Dca18915.1.exon3;Parent=Dca18915.1 |
