Carnation DB

Dca18921.1

Annotation

10-exons
f-1
sp|Q3HRZ1_SOLTU#Vacuolar protein sorting-associated protein 26-like protein#Solanum tuberosum (Potato)#unknown#GO:0030904;GO:0007034#0F1P1C
Repeat List (scaffold1989)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18921.1	1	300	301	90.69	300	91	3e-161
Target_name	Start	End	Length	Cov(%)
sp\|Q3HRZ1_SOLTU	2	301	301	99.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca18921.1	1	301	301	86.71	301	87	2e-156
Target_name	Start	End	Length	Cov(%)
AT5G53530.1	2	302	302	99.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1989	Augustus	mRNA	11585	18805	.	+	.	ID=Dca18921.1;Parent=Dca18921
scaffold1989	Augustus	exon	11585	11659	.	+	.	ID=Dca18921.1.exon1;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	11762	11836	.	+	.	ID=Dca18921.1.exon2;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	12003	12075	.	+	.	ID=Dca18921.1.exon3;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	13797	13841	.	+	.	ID=Dca18921.1.exon4;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	14083	14194	.	+	.	ID=Dca18921.1.exon5;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	14740	14806	.	+	.	ID=Dca18921.1.exon6;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	15510	15554	.	+	.	ID=Dca18921.1.exon7;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	15956	16011	.	+	.	ID=Dca18921.1.exon8;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	18053	18228	.	+	.	ID=Dca18921.1.exon9;Parent=Dca18921.1
scaffold1989	Augus-PASA	exon	18624	18805	.	+	.	ID=Dca18921.1.exon10;Parent=Dca18921.1
scaffold1989	Augustus	mRNA	11585	18805	.	+	.	ID=Dca18921.2;Parent=Dca18921
scaffold1989	Augustus	exon	11585	11659	.	+	.	ID=Dca18921.2.exon1;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	12003	12075	.	+	.	ID=Dca18921.2.exon2;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	13797	13841	.	+	.	ID=Dca18921.2.exon3;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	14083	14194	.	+	.	ID=Dca18921.2.exon4;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	14740	14806	.	+	.	ID=Dca18921.2.exon5;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	15510	15554	.	+	.	ID=Dca18921.2.exon6;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	15956	16011	.	+	.	ID=Dca18921.2.exon7;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	18053	18228	.	+	.	ID=Dca18921.2.exon8;Parent=Dca18921.2
scaffold1989	Augus-PASA	exon	18624	18805	.	+	.	ID=Dca18921.2.exon9;Parent=Dca18921.2