Dca18977.1
Annotation
- 3-exons
- f-1
- sp|A9PFB3_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005488#1F0P0C
- AT5G20190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:6814093-6815171 FORWARD LENGTH=290
- Repeat List (scaffold1993)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18977.1 |
1 |
294 |
294 |
46.93 |
294 |
44 |
6e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PFB3_POPTR |
1 |
304 |
304 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca18977.1 |
1 |
256 |
294 |
38.09 |
256 |
42 |
2e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G20190.1 |
1 |
254 |
290 |
87.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1993 |
Augus-PASA |
mRNA |
6288 |
7827 |
. |
- |
. |
ID=Dca18977.1;Parent=Dca18977 |
| scaffold1993 |
Augus-PASA |
exon |
6288 |
6444 |
. |
- |
. |
ID=Dca18977.1.exon1;Parent=Dca18977.1 |
| scaffold1993 |
Augus-PASA |
exon |
6585 |
6757 |
. |
- |
. |
ID=Dca18977.1.exon2;Parent=Dca18977.1 |
| scaffold1993 |
Augus-PASA |
exon |
7273 |
7827 |
. |
- |
. |
ID=Dca18977.1.exon3;Parent=Dca18977.1 |
