Carnation DB

Dca19052.1

Annotation

5-exons
f-1
sp|D7LX25_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488628#unknown#0F0P0C
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19052.1	13	123	124	63.7	111	72	1e-39
Target_name	Start	End	Length	Cov(%)
sp\|D7LX25_ARALL	13	120	120	90

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19052.1	28	123	124	60.48	96	79	9e-40
Target_name	Start	End	Length	Cov(%)
AT5G17610.1	26	121	121	79.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augus-PASA	mRNA	106018	107313	.	-	.	ID=Dca19052.1;Parent=Dca19052
scaffold2	Augus-PASA	exon	106018	106066	.	-	.	ID=Dca19052.1.exon1;Parent=Dca19052.1
scaffold2	Augus-PASA	exon	106166	106224	.	-	.	ID=Dca19052.1.exon2;Parent=Dca19052.1
scaffold2	Augus-PASA	exon	106313	106418	.	-	.	ID=Dca19052.1.exon3;Parent=Dca19052.1
scaffold2	Augus-PASA	exon	106543	106592	.	-	.	ID=Dca19052.1.exon4;Parent=Dca19052.1
scaffold2	Augustus	exon	107203	107313	.	-	.	ID=Dca19052.1.exon5;Parent=Dca19052.1