Carnation DB

Dca19104.1

Annotation

5-exons
f-1
sp|B9RD58_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1609910#GO:0006355#0F1P0C
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19104.1	5	422	435	47.81	418	43	2e-71
Target_name	Start	End	Length	Cov(%)
sp\|B9RD58_RICCO	3	457	465	97.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19104.1	4	416	435	40.45	413	40	1e-44
Target_name	Start	End	Length	Cov(%)
AT4G00050.1	2	385	399	96.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augustus	mRNA	544943	548212	.	-	.	ID=Dca19104.1;Parent=Dca19104
scaffold2	Augustus	exon	544943	545044	.	-	.	ID=Dca19104.1.exon1;Parent=Dca19104.1
scaffold2	Augustus	exon	545165	545542	.	-	.	ID=Dca19104.1.exon2;Parent=Dca19104.1
scaffold2	Augustus	exon	546746	546850	.	-	.	ID=Dca19104.1.exon3;Parent=Dca19104.1
scaffold2	Augustus	exon	547314	547890	.	-	.	ID=Dca19104.1.exon4;Parent=Dca19104.1
scaffold2	Augustus	exon	548067	548212	.	-	.	ID=Dca19104.1.exon5;Parent=Dca19104.1