Carnation DB

Dca19132.1

Annotation

12-exons
f-1
sp|B9RDE8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1612470#GO:0003700#1F0P0C
AT2G45460.3 | Symbols: | SMAD/FHA domain-containing protein | chr2:18737054-18741690 REVERSE LENGTH=916
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19132.1	1	850	872	56.3	850	55	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RDE8_RICCO	1	879	900	97.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19132.1	53	791	872	44.95	739	49	0
Target_name	Start	End	Length	Cov(%)
AT2G45460.3	48	835	916	86.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augustus	mRNA	827738	834048	.	-	.	ID=Dca19132.1;Parent=Dca19132
scaffold2	Augustus	exon	827738	828845	.	-	.	ID=Dca19132.1.exon1;Parent=Dca19132.1
scaffold2	Augustus	exon	829140	829261	.	-	.	ID=Dca19132.1.exon2;Parent=Dca19132.1
scaffold2	Augustus	exon	829790	829849	.	-	.	ID=Dca19132.1.exon3;Parent=Dca19132.1
scaffold2	Augustus	exon	829958	830056	.	-	.	ID=Dca19132.1.exon4;Parent=Dca19132.1
scaffold2	Augustus	exon	830285	830335	.	-	.	ID=Dca19132.1.exon5;Parent=Dca19132.1
scaffold2	Augustus	exon	830416	830617	.	-	.	ID=Dca19132.1.exon6;Parent=Dca19132.1
scaffold2	Augustus	exon	831224	831426	.	-	.	ID=Dca19132.1.exon7;Parent=Dca19132.1
scaffold2	Augustus	exon	831855	831979	.	-	.	ID=Dca19132.1.exon8;Parent=Dca19132.1
scaffold2	Augustus	exon	832107	832187	.	-	.	ID=Dca19132.1.exon9;Parent=Dca19132.1
scaffold2	Augustus	exon	832472	832581	.	-	.	ID=Dca19132.1.exon10;Parent=Dca19132.1
scaffold2	Augustus	exon	832722	832906	.	-	.	ID=Dca19132.1.exon11;Parent=Dca19132.1
scaffold2	Augustus	exon	833776	834048	.	-	.	ID=Dca19132.1.exon12;Parent=Dca19132.1