Carnation DB

Dca19172.1

Annotation

6-exons
f-1
sp|B9ID35_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824910#GO:0003677;GO:0003899#2F0P0C
AT5G51940.1 | Symbols: NRPB6A, NRPD6A, NRPE6A | RNA polymerase Rpb6 | chr5:21104679-21105796 FORWARD LENGTH=144
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19172.1	1	145	145	75.86	145	76	3e-54
Target_name	Start	End	Length	Cov(%)
sp\|B9ID35_POPTR	1	143	143	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19172.1	1	145	145	74.48	145	75	1e-49
Target_name	Start	End	Length	Cov(%)
AT5G51940.1	1	144	144	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augus-PASA	mRNA	1079954	1082014	.	-	.	ID=Dca19172.1;Parent=Dca19172
scaffold2	Augus-PASA	exon	1079954	1080023	.	-	.	ID=Dca19172.1.exon1;Parent=Dca19172.1
scaffold2	Augus-PASA	exon	1080346	1080413	.	-	.	ID=Dca19172.1.exon2;Parent=Dca19172.1
scaffold2	Augus-PASA	exon	1080768	1080819	.	-	.	ID=Dca19172.1.exon3;Parent=Dca19172.1
scaffold2	Augus-PASA	exon	1080914	1081086	.	-	.	ID=Dca19172.1.exon4;Parent=Dca19172.1
scaffold2	Augus-PASA	exon	1081162	1081195	.	-	.	ID=Dca19172.1.exon5;Parent=Dca19172.1
scaffold2	Augus-PASA	exon	1081974	1082014	.	-	.	ID=Dca19172.1.exon6;Parent=Dca19172.1