Carnation DB

Dca19178.1

Annotation

5-exons
f-1
sp|F6I314_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02030#GO:0008270#1F0P0C
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:22645680-22647290 FORWARD LENGTH=379
Repeat List (scaffold2)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19178.1	17	357	359	49.58	341	53	1e-91
Target_name	Start	End	Length	Cov(%)
sp\|F6I314_VITVI	46	380	382	87.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19178.1	16	359	359	45.4	344	48	7e-85
Target_name	Start	End	Length	Cov(%)
AT3G61180.1	47	379	379	87.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2	Augustus	mRNA	1131853	1133571	.	+	.	ID=Dca19178.1;Parent=Dca19178
scaffold2	Augustus	exon	1131853	1132331	.	+	.	ID=Dca19178.1.exon1;Parent=Dca19178.1
scaffold2	Augustus	exon	1132688	1132807	.	+	.	ID=Dca19178.1.exon2;Parent=Dca19178.1
scaffold2	Augustus	exon	1132911	1133043	.	+	.	ID=Dca19178.1.exon3;Parent=Dca19178.1
scaffold2	Augustus	exon	1133139	1133309	.	+	.	ID=Dca19178.1.exon4;Parent=Dca19178.1
scaffold2	Augustus	exon	1133395	1133571	.	+	.	ID=Dca19178.1.exon5;Parent=Dca19178.1