Carnation DB

Dca19211.1

Annotation

21-exons
f-1
sp|O04143_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
AT3G15410.2 | Symbols: | Leucine-rich repeat (LRR) family protein | chr3:5203380-5207279 FORWARD LENGTH=590
Repeat List (scaffold20)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19211.1	1	581	581	84.16	581	85	0
Target_name	Start	End	Length	Cov(%)
sp\|O04143_SILLA	1	581	581	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19211.1	12	334	581	17.38	323	30	9e-19
Target_name	Start	End	Length	Cov(%)
AT3G15410.2	262	588	590	55.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold20	Augus-PASA	mRNA	33617	42335	.	+	.	ID=Dca19211.1;Parent=Dca19211
scaffold20	Augus-PASA	exon	33617	33681	.	+	.	ID=Dca19211.1.exon1;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	34647	34710	.	+	.	ID=Dca19211.1.exon2;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	34840	34976	.	+	.	ID=Dca19211.1.exon3;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	35072	35158	.	+	.	ID=Dca19211.1.exon4;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	35348	35423	.	+	.	ID=Dca19211.1.exon5;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	36126	36200	.	+	.	ID=Dca19211.1.exon6;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	36288	36357	.	+	.	ID=Dca19211.1.exon7;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	36455	36532	.	+	.	ID=Dca19211.1.exon8;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	36675	36735	.	+	.	ID=Dca19211.1.exon9;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	36843	36921	.	+	.	ID=Dca19211.1.exon10;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	37177	37267	.	+	.	ID=Dca19211.1.exon11;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	37617	37677	.	+	.	ID=Dca19211.1.exon12;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	37763	37830	.	+	.	ID=Dca19211.1.exon13;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	37920	37990	.	+	.	ID=Dca19211.1.exon14;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	38327	38464	.	+	.	ID=Dca19211.1.exon15;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	38956	39060	.	+	.	ID=Dca19211.1.exon16;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	39149	39273	.	+	.	ID=Dca19211.1.exon17;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	39409	39505	.	+	.	ID=Dca19211.1.exon18;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	40617	40691	.	+	.	ID=Dca19211.1.exon19;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	41193	41248	.	+	.	ID=Dca19211.1.exon20;Parent=Dca19211.1
scaffold20	Augus-PASA	exon	42269	42335	.	+	.	ID=Dca19211.1.exon21;Parent=Dca19211.1