Carnation DB

Dca19222.1

Annotation

5-exons
f-1
sp|A5BKN3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_042276#GO:0008270#1F0P0C
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:17099335-17101683 FORWARD LENGTH=645
Repeat List (scaffold20)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19222.1	1	717	720	50.13	717	49	2e-163
Target_name	Start	End	Length	Cov(%)
sp\|A5BKN3_VITVI	1	732	1022	71.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19222.1	1	720	720	37.22	720	37	2e-90
Target_name	Start	End	Length	Cov(%)
AT1G45180.1	1	640	645	99.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold20	Augus-PASA	mRNA	129457	134691	.	+	.	ID=Dca19222.1;Parent=Dca19222
scaffold20	Augus-PASA	exon	129457	131190	.	+	.	ID=Dca19222.1.exon1;Parent=Dca19222.1
scaffold20	Augus-PASA	exon	131907	131957	.	+	.	ID=Dca19222.1.exon2;Parent=Dca19222.1
scaffold20	Augus-PASA	exon	133775	133873	.	+	.	ID=Dca19222.1.exon3;Parent=Dca19222.1
scaffold20	Augus-PASA	exon	133971	134114	.	+	.	ID=Dca19222.1.exon4;Parent=Dca19222.1
scaffold20	Augus-PASA	exon	134557	134691	.	+	.	ID=Dca19222.1.exon5;Parent=Dca19222.1