Carnation DB

Dca19247.1

Annotation

16-exons
f-1
sp|F6H186_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g08850#GO:0016021;GO:0005524;GO:0005388;GO:0046872;GO:0006754#3F1P1C
sp|B9R6Y5_RICCO#Cation-transporting atpase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1586900#GO:0016021;GO:0005524;GO:0005388;GO:0046872;GO:0006754#3F1P1C
Repeat List (scaffold20)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19247.1	89	274	764	22.12	186	84	2e-90
Target_name	Start	End	Length	Cov(%)
sp\|F6H186_VITVI	546	748	927	21.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19247.1	89	274	764	21.85	186	83	1e-89
Target_name	Start	End	Length	Cov(%)
AT1G10130.1	618	820	998	20.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold20	Augustus	mRNA	346203	354177	.	+	.	ID=Dca19247.1;Parent=Dca19247
scaffold20	Augustus	exon	346203	346615	.	+	.	ID=Dca19247.1.exon1;Parent=Dca19247.1
scaffold20	Augustus	exon	346746	346803	.	+	.	ID=Dca19247.1.exon2;Parent=Dca19247.1
scaffold20	Augustus	exon	347885	347977	.	+	.	ID=Dca19247.1.exon3;Parent=Dca19247.1
scaffold20	Augustus	exon	348500	348631	.	+	.	ID=Dca19247.1.exon4;Parent=Dca19247.1
scaffold20	Augustus	exon	349249	349350	.	+	.	ID=Dca19247.1.exon5;Parent=Dca19247.1
scaffold20	Augustus	exon	350214	350239	.	+	.	ID=Dca19247.1.exon6;Parent=Dca19247.1
scaffold20	Augustus	exon	350495	350576	.	+	.	ID=Dca19247.1.exon7;Parent=Dca19247.1
scaffold20	Augustus	exon	350819	351030	.	+	.	ID=Dca19247.1.exon8;Parent=Dca19247.1
scaffold20	Augustus	exon	351132	351201	.	+	.	ID=Dca19247.1.exon9;Parent=Dca19247.1
scaffold20	Augustus	exon	351681	351793	.	+	.	ID=Dca19247.1.exon10;Parent=Dca19247.1
scaffold20	Augustus	exon	351920	352415	.	+	.	ID=Dca19247.1.exon11;Parent=Dca19247.1
scaffold20	Augustus	exon	352505	352573	.	+	.	ID=Dca19247.1.exon12;Parent=Dca19247.1
scaffold20	Augustus	exon	353114	353169	.	+	.	ID=Dca19247.1.exon13;Parent=Dca19247.1
scaffold20	Augustus	exon	353291	353372	.	+	.	ID=Dca19247.1.exon14;Parent=Dca19247.1
scaffold20	Augustus	exon	353561	353772	.	+	.	ID=Dca19247.1.exon15;Parent=Dca19247.1
scaffold20	Augustus	exon	354099	354177	.	+	.	ID=Dca19247.1.exon16;Parent=Dca19247.1