Carnation DB

Dca19286.1

Annotation

7-exons
f-1
sp|B9GWE8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817339#GO:0005663;GO:0005524;GO:0003689;GO:0006260#2F1P1C
sp|B9RC55_RICCO#Replication factor C / DNA polymerase III gamma-tau subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1685440#GO:0005663;GO:0005524;GO:0003689;GO:0003887;GO:0006260#3F1P1C
Repeat List (scaffold200)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19286.1	3	327	327	88.07	325	89	6e-176
Target_name	Start	End	Length	Cov(%)
sp\|B9GWE8_POPTR	6	330	330	98.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19286.1	4	327	327	86.54	324	88	3e-172
Target_name	Start	End	Length	Cov(%)
Os04t0569000-01	12	335	336	96.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold200	Augus-PASA	mRNA	70389	72606	.	-	.	ID=Dca19286.1;Parent=Dca19286
scaffold200	Augus-PASA	exon	70389	70499	.	-	.	ID=Dca19286.1.exon1;Parent=Dca19286.1
scaffold200	Augus-PASA	exon	70619	70813	.	-	.	ID=Dca19286.1.exon2;Parent=Dca19286.1
scaffold200	Augus-PASA	exon	70931	71059	.	-	.	ID=Dca19286.1.exon3;Parent=Dca19286.1
scaffold200	Augus-PASA	exon	71255	71450	.	-	.	ID=Dca19286.1.exon4;Parent=Dca19286.1
scaffold200	Augus-PASA	exon	71566	71667	.	-	.	ID=Dca19286.1.exon5;Parent=Dca19286.1
scaffold200	Augus-PASA	exon	71768	71874	.	-	.	ID=Dca19286.1.exon6;Parent=Dca19286.1
scaffold200	Augus-PASA	exon	72463	72606	.	-	.	ID=Dca19286.1.exon7;Parent=Dca19286.1