Dca19300.1
Annotation
- 4-exons
- f-1
- sp|B9I1R7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_235497#GO:0005958;GO:0004003;GO:0006303#1F1P1C
- sp|Q0KJ40_POPNI#Ku70 homolog#Populus nigra (Lombardy poplar)#Name=PnKu70#GO:0005958;GO:0004003;GO:0003677;GO:0006303#2F1P1C
- Repeat List (scaffold200)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19300.1 |
18 |
166 |
188 |
56.38 |
149 |
70 |
1e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I1R7_POPTR |
467 |
619 |
628 |
24.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19300.1 |
18 |
159 |
188 |
48.4 |
142 |
63 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0184900-01 |
463 |
608 |
625 |
23.36 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold200 |
Augustus |
mRNA |
195490 |
196797 |
. |
- |
. |
ID=Dca19300.1;Parent=Dca19300 |
| scaffold200 |
Augustus |
exon |
195490 |
195642 |
. |
- |
. |
ID=Dca19300.1.exon1;Parent=Dca19300.1 |
| scaffold200 |
Augustus |
exon |
195766 |
195937 |
. |
- |
. |
ID=Dca19300.1.exon2;Parent=Dca19300.1 |
| scaffold200 |
Augustus |
exon |
196459 |
196561 |
. |
- |
. |
ID=Dca19300.1.exon3;Parent=Dca19300.1 |
| scaffold200 |
Augustus |
exon |
196659 |
196797 |
. |
- |
. |
ID=Dca19300.1.exon4;Parent=Dca19300.1 |
