Carnation DB

Dca19329.1

Annotation

5-exons
f-1
sp|Q4H1G2_BETVU#Methionine synthase#Beta vulgaris (Sugar beet)#Name=BvMS1#GO:0003871;GO:0008270;GO:0009086#2F1P0C
Repeat List (scaffold2001)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19329.1	33	153	186	58.06	121	90	9e-55
Target_name	Start	End	Length	Cov(%)
sp\|Q4H1G2_BETVU	337	457	794	15.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19329.1	33	153	186	57.52	121	89	8e-56
Target_name	Start	End	Length	Cov(%)
AT5G17920.1	328	448	765	15.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2001	Augustus	mRNA	30805	33520	.	+	.	ID=Dca19329.1;Parent=Dca19329
scaffold2001	Augustus	exon	30805	30873	.	+	.	ID=Dca19329.1.exon1;Parent=Dca19329.1
scaffold2001	Augustus	exon	31910	32077	.	+	.	ID=Dca19329.1.exon2;Parent=Dca19329.1
scaffold2001	Augustus	exon	32195	32275	.	+	.	ID=Dca19329.1.exon3;Parent=Dca19329.1
scaffold2001	Augustus	exon	32401	32541	.	+	.	ID=Dca19329.1.exon4;Parent=Dca19329.1
scaffold2001	Augustus	exon	33419	33520	.	+	.	ID=Dca19329.1.exon5;Parent=Dca19329.1