Dca19374.1
Annotation
- 3-exons
- f-1
- sp|Q5MG99_IPOBA#Hypothetical retrotransposon#Ipomoea batatas (Sweet potato) (Convolvulus batatas)#unknown#GO:0003676;GO:0015074#1F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold2006)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19374.1 |
506 |
557 |
566 |
6.36 |
52 |
70 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5MG99_IPOBA |
862 |
913 |
1415 |
3.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2006 |
Augustus |
mRNA |
12665 |
15456 |
. |
+ |
. |
ID=Dca19374.1;Parent=Dca19374 |
| scaffold2006 |
Augustus |
exon |
12665 |
13844 |
. |
+ |
. |
ID=Dca19374.1.exon1;Parent=Dca19374.1 |
| scaffold2006 |
Augustus |
exon |
13950 |
14250 |
. |
+ |
. |
ID=Dca19374.1.exon2;Parent=Dca19374.1 |
| scaffold2006 |
Augustus |
exon |
15237 |
15456 |
. |
+ |
. |
ID=Dca19374.1.exon3;Parent=Dca19374.1 |
