Carnation DB

Dca19424.1

Annotation

7-exons
f-1
sp|B9SJ47_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0843010#unknown#0F0P0C
AT1G23060.1 | Symbols: | BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT1G70950.1); Has 449 Blast hits to 419 proteins in 98 species: Archae - 0; Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). | chr1:8170946-8172739 REVERSE LENGTH=367
Repeat List (scaffold201)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19424.1	1	214	711	13.08	214	39	5e-33
Target_name	Start	End	Length	Cov(%)
sp\|B9SJ47_RICCO	1	231	639	36.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19424.1	1	128	711	8.86	128	49	4e-28
Target_name	Start	End	Length	Cov(%)
AT1G23060.1	1	129	367	35.14

seqname	source	feature	start	end	score	strand	frame	group
scaffold201	Augustus	mRNA	108578	112281	.	-	.	ID=Dca19424.1;Parent=Dca19424
scaffold201	Augustus	exon	108578	109024	.	-	.	ID=Dca19424.1.exon1;Parent=Dca19424.1
scaffold201	Augustus	exon	109134	109229	.	-	.	ID=Dca19424.1.exon2;Parent=Dca19424.1
scaffold201	Augustus	exon	109471	109564	.	-	.	ID=Dca19424.1.exon3;Parent=Dca19424.1
scaffold201	Augustus	exon	109651	110153	.	-	.	ID=Dca19424.1.exon4;Parent=Dca19424.1
scaffold201	Augustus	exon	110381	110566	.	-	.	ID=Dca19424.1.exon5;Parent=Dca19424.1
scaffold201	Augustus	exon	110674	111441	.	-	.	ID=Dca19424.1.exon6;Parent=Dca19424.1
scaffold201	Augustus	exon	112240	112281	.	-	.	ID=Dca19424.1.exon7;Parent=Dca19424.1