Dca19427.1
Annotation
- 2-exons
- f-1
- sp|B9HW76_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_805134#unknown#0F0P0C
- AT2G01340.1 | Symbols: At17.1 | Encodes a protein whose expression is responsive to nematode infection. | chr2:164014-165068 FORWARD LENGTH=215
- Repeat List (scaffold201)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19427.1 |
1 |
247 |
254 |
45.66 |
247 |
47 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HW76_POPTR |
1 |
205 |
215 |
95.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19427.1 |
1 |
197 |
254 |
36.61 |
197 |
48 |
9e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G01340.1 |
1 |
168 |
215 |
78.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold201 |
Augustus |
mRNA |
131693 |
136236 |
. |
- |
. |
ID=Dca19427.1;Parent=Dca19427 |
| scaffold201 |
Augustus |
exon |
131693 |
131746 |
. |
- |
. |
ID=Dca19427.1.exon1;Parent=Dca19427.1 |
| scaffold201 |
Augustus |
exon |
135526 |
136236 |
. |
- |
. |
ID=Dca19427.1.exon2;Parent=Dca19427.1 |
