Dca19479.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2014)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19479.1 |
187 |
477 |
504 |
36.3 |
291 |
59 |
1e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
473 |
786 |
1501 |
20.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19479.1 |
190 |
461 |
504 |
21.82 |
272 |
40 |
8e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
165 |
438 |
707 |
38.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2014 |
Augustus |
mRNA |
3827 |
5739 |
. |
+ |
. |
ID=Dca19479.1;Parent=Dca19479 |
| scaffold2014 |
Augustus |
exon |
3827 |
3924 |
. |
+ |
. |
ID=Dca19479.1.exon1;Parent=Dca19479.1 |
| scaffold2014 |
Augustus |
exon |
4016 |
4479 |
. |
+ |
. |
ID=Dca19479.1.exon2;Parent=Dca19479.1 |
| scaffold2014 |
Augustus |
exon |
4787 |
5739 |
. |
+ |
. |
ID=Dca19479.1.exon3;Parent=Dca19479.1 |
