Dca19487.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold20146)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19487.1 |
7 |
215 |
217 |
58.52 |
209 |
61 |
2e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1105 |
1313 |
1313 |
15.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19487.1 |
24 |
200 |
217 |
29.95 |
177 |
37 |
4e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1208 |
1382 |
1401 |
12.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold20146 |
Augustus |
mRNA |
1625 |
5423 |
. |
- |
. |
ID=Dca19487.1;Parent=Dca19487 |
| scaffold20146 |
Augustus |
exon |
1625 |
2226 |
. |
- |
. |
ID=Dca19487.1.exon1;Parent=Dca19487.1 |
| scaffold20146 |
Augustus |
exon |
5372 |
5423 |
. |
- |
. |
ID=Dca19487.1.exon2;Parent=Dca19487.1 |
