Dca19541.1
Annotation
- 4-exons
- f-517
- sp|E7BQD4_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold202)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19541.1 |
4 |
577 |
577 |
51.47 |
574 |
50 |
8e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E7BQD4_SILLA |
210 |
798 |
1518 |
38.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19541.1 |
358 |
577 |
577 |
19.58 |
220 |
52 |
3e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
555 |
768 |
1539 |
13.9 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold202 |
Augustus |
mRNA |
44190 |
48574 |
. |
- |
. |
ID=Dca19541.1;Parent=Dca19541 |
| scaffold202 |
Augustus |
exon |
44190 |
45302 |
. |
- |
. |
ID=Dca19541.1.exon1;Parent=Dca19541.1 |
| scaffold202 |
Augustus |
exon |
45369 |
46048 |
. |
- |
. |
ID=Dca19541.1.exon2;Parent=Dca19541.1 |
| scaffold202 |
Augustus |
exon |
46226 |
46337 |
. |
- |
. |
ID=Dca19541.1.exon3;Parent=Dca19541.1 |
| scaffold202 |
Augustus |
exon |
48230 |
48574 |
. |
- |
. |
ID=Dca19541.1.exon4;Parent=Dca19541.1 |
