Dca19552.1
Annotation
- 4-exons
- f-1
- sp|B9GSY9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_850143#GO:0005622;GO:0008270#1F0P1C
- Os05t0279400-02 Zinc finger, RING-type domain containing protein.
- Repeat List (scaffold202)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19552.1 |
1 |
237 |
251 |
72.5 |
237 |
76 |
1e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GSY9_POPTR |
1 |
241 |
819 |
29.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19552.1 |
1 |
237 |
251 |
70.51 |
237 |
73 |
1e-109
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0279400-02 |
1 |
245 |
854 |
28.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold202 |
Augustus |
mRNA |
99233 |
100251 |
. |
- |
. |
ID=Dca19552.1;Parent=Dca19552 |
| scaffold202 |
Augustus |
exon |
99233 |
99326 |
. |
- |
. |
ID=Dca19552.1.exon1;Parent=Dca19552.1 |
| scaffold202 |
Augustus |
exon |
99416 |
99624 |
. |
- |
. |
ID=Dca19552.1.exon2;Parent=Dca19552.1 |
| scaffold202 |
Augustus |
exon |
99712 |
99996 |
. |
- |
. |
ID=Dca19552.1.exon3;Parent=Dca19552.1 |
| scaffold202 |
Augustus |
exon |
100084 |
100251 |
. |
- |
. |
ID=Dca19552.1.exon4;Parent=Dca19552.1 |
