Carnation DB

Dca19554.1

Annotation

8-exons
f-1
sp|A9PIB0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_718232#GO:0003676;GO:0000166#2F0P0C
AT5G44200.1 | Symbols: CBP20, ATCBP20 | CAP-binding protein 20 | chr5:17802062-17803875 REVERSE LENGTH=257
Repeat List (scaffold202)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19554.1	1	262	263	77.18	262	78	2e-110
Target_name	Start	End	Length	Cov(%)
sp\|A9PIB0_POPTR	1	254	255	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19554.1	1	263	263	72.62	263	73	7e-97
Target_name	Start	End	Length	Cov(%)
AT5G44200.1	1	257	257	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold202	Augus-PASA	mRNA	108110	113039	.	+	.	ID=Dca19554.1;Parent=Dca19554
scaffold202	Augus-PASA	exon	108110	108127	.	+	.	ID=Dca19554.1.exon1;Parent=Dca19554.1
scaffold202	Augus-PASA	exon	108261	108484	.	+	.	ID=Dca19554.1.exon2;Parent=Dca19554.1
scaffold202	Augus-PASA	exon	108581	108719	.	+	.	ID=Dca19554.1.exon3;Parent=Dca19554.1
scaffold202	Augus-PASA	exon	108807	108840	.	+	.	ID=Dca19554.1.exon4;Parent=Dca19554.1
scaffold202	Augus-PASA	exon	110033	110143	.	+	.	ID=Dca19554.1.exon5;Parent=Dca19554.1
scaffold202	Augus-PASA	exon	110708	110767	.	+	.	ID=Dca19554.1.exon6;Parent=Dca19554.1
scaffold202	Augus-PASA	exon	110867	110997	.	+	.	ID=Dca19554.1.exon7;Parent=Dca19554.1
scaffold202	Augus-PASA	exon	112965	113039	.	+	.	ID=Dca19554.1.exon8;Parent=Dca19554.1