Carnation DB

Dca19577.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold2021)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19577.1	17	598	630	49.84	582	51	7e-151
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	178	787	1717	35.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19577.1	314	404	630	5.71	91	39	5e-11
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2021	Augustus	mRNA	17510	21416	.	+	.	ID=Dca19577.1;Parent=Dca19577
scaffold2021	Augustus	exon	17510	17546	.	+	.	ID=Dca19577.1.exon1;Parent=Dca19577.1
scaffold2021	Augustus	exon	17651	17989	.	+	.	ID=Dca19577.1.exon2;Parent=Dca19577.1
scaffold2021	Augustus	exon	18067	18536	.	+	.	ID=Dca19577.1.exon3;Parent=Dca19577.1
scaffold2021	Augustus	exon	18608	19620	.	+	.	ID=Dca19577.1.exon4;Parent=Dca19577.1
scaffold2021	Augustus	exon	21383	21416	.	+	.	ID=Dca19577.1.exon5;Parent=Dca19577.1