Dca19586.1
Annotation
- 4-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2022)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19586.1 |
1 |
592 |
1230 |
30 |
592 |
63 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
1 |
587 |
1333 |
44.03 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19586.1 |
5 |
591 |
1230 |
15.36 |
587 |
30 |
3e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
40 |
620 |
1401 |
41.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2022 |
Augustus |
mRNA |
17363 |
21457 |
. |
- |
. |
ID=Dca19586.1;Parent=Dca19586 |
| scaffold2022 |
Augustus |
exon |
17363 |
18912 |
. |
- |
. |
ID=Dca19586.1.exon1;Parent=Dca19586.1 |
| scaffold2022 |
Augustus |
exon |
19065 |
19175 |
. |
- |
. |
ID=Dca19586.1.exon2;Parent=Dca19586.1 |
| scaffold2022 |
Augustus |
exon |
19353 |
19601 |
. |
- |
. |
ID=Dca19586.1.exon3;Parent=Dca19586.1 |
| scaffold2022 |
Augustus |
exon |
19675 |
21457 |
. |
- |
. |
ID=Dca19586.1.exon4;Parent=Dca19586.1 |
