Carnation DB

Dca19613.1

Annotation

12-exons
f-1
sp|A5BA39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041694#GO:0003676;GO:0015074#1F1P0C
AT5G27395.1 | Symbols: | Mitochondrial inner membrane translocase complex, subunit Tim44-related protein | chr5:9671845-9674085 REVERSE LENGTH=313
Repeat List (scaffold2024)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19613.1	1	275	554	32.67	275	66	1e-106
Target_name	Start	End	Length	Cov(%)
sp\|A5BA39_VITVI	819	1093	1099	25.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19613.1	315	550	554	29.24	236	69	6e-94
Target_name	Start	End	Length	Cov(%)
AT5G27395.1	76	311	313	75.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2024	Augus-PASA	mRNA	15349	24816	.	-	.	ID=Dca19613.1;Parent=Dca19613
scaffold2024	Augus-PASA	exon	15349	15441	.	-	.	ID=Dca19613.1.exon1;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	16246	16302	.	-	.	ID=Dca19613.1.exon2;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	17101	17169	.	-	.	ID=Dca19613.1.exon3;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	18437	18538	.	-	.	ID=Dca19613.1.exon4;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	18621	18689	.	-	.	ID=Dca19613.1.exon5;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	18885	18974	.	-	.	ID=Dca19613.1.exon6;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	19436	19487	.	-	.	ID=Dca19613.1.exon7;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	19946	20028	.	-	.	ID=Dca19613.1.exon8;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	21096	21176	.	-	.	ID=Dca19613.1.exon9;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	21318	21415	.	-	.	ID=Dca19613.1.exon10;Parent=Dca19613.1
scaffold2024	Augus-PASA	exon	22654	22694	.	-	.	ID=Dca19613.1.exon11;Parent=Dca19613.1
scaffold2024	Augustus	exon	23987	24816	.	-	.	ID=Dca19613.1.exon12;Parent=Dca19613.1