Dca19614.1
Annotation
- 4-exons
- f-1
- sp|A8YPK5_MESCR#Sodium/hydrogen exchanger#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=nhx3#GO:0016021;GO:0015385;GO:0006885#1F1P1C
- Repeat List (scaffold2024)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19614.1 |
54 |
232 |
243 |
46.09 |
179 |
55 |
2e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A8YPK5_MESCR |
342 |
543 |
549 |
36.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19614.1 |
40 |
229 |
243 |
35.39 |
190 |
39 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0648000-01 |
316 |
533 |
546 |
39.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2024 |
Augustus |
mRNA |
53304 |
54550 |
. |
- |
. |
ID=Dca19614.1;Parent=Dca19614 |
| scaffold2024 |
Augustus |
exon |
53304 |
53651 |
. |
- |
. |
ID=Dca19614.1.exon1;Parent=Dca19614.1 |
| scaffold2024 |
Augustus |
exon |
53725 |
53811 |
. |
- |
. |
ID=Dca19614.1.exon2;Parent=Dca19614.1 |
| scaffold2024 |
Augustus |
exon |
54028 |
54166 |
. |
- |
. |
ID=Dca19614.1.exon3;Parent=Dca19614.1 |
| scaffold2024 |
Augustus |
exon |
54393 |
54550 |
. |
- |
. |
ID=Dca19614.1.exon4;Parent=Dca19614.1 |
