Dca19628.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2025)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19628.1 |
1 |
465 |
474 |
65.4 |
465 |
59 |
3e-179
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
610 |
1141 |
1501 |
35.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca19628.1 |
2 |
464 |
474 |
38.18 |
463 |
37 |
3e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
641 |
1134 |
1539 |
32.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2025 |
Augustus |
mRNA |
56838 |
58453 |
. |
+ |
. |
ID=Dca19628.1;Parent=Dca19628 |
| scaffold2025 |
Augustus |
exon |
56838 |
57201 |
. |
+ |
. |
ID=Dca19628.1.exon1;Parent=Dca19628.1 |
| scaffold2025 |
Augustus |
exon |
57273 |
57949 |
. |
+ |
. |
ID=Dca19628.1.exon2;Parent=Dca19628.1 |
| scaffold2025 |
Augustus |
exon |
58070 |
58453 |
. |
+ |
. |
ID=Dca19628.1.exon3;Parent=Dca19628.1 |
