Carnation DB

Dca19679.1

Annotation

5-exons
f-1
sp|B9N154_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_836860#GO:0004725#1F0P0C
AT3G02800.1 | Symbols: | Tyrosine phosphatase family protein | chr3:606638-607704 REVERSE LENGTH=203
Repeat List (scaffold203)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19679.1	18	206	207	62.8	189	68	4e-77
Target_name	Start	End	Length	Cov(%)
sp\|B9N154_POPTR	9	201	202	95.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca19679.1	6	207	207	59.42	202	60	9e-71
Target_name	Start	End	Length	Cov(%)
AT3G02800.1	3	201	203	98.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold203	Augus-PASA	mRNA	128755	130238	.	-	.	ID=Dca19679.1;Parent=Dca19679
scaffold203	Augus-PASA	exon	128755	129012	.	-	.	ID=Dca19679.1.exon1;Parent=Dca19679.1
scaffold203	Augus-PASA	exon	129116	129159	.	-	.	ID=Dca19679.1.exon2;Parent=Dca19679.1
scaffold203	Augus-PASA	exon	129257	129305	.	-	.	ID=Dca19679.1.exon3;Parent=Dca19679.1
scaffold203	Augus-PASA	exon	129838	129931	.	-	.	ID=Dca19679.1.exon4;Parent=Dca19679.1
scaffold203	Augus-PASA	exon	130060	130238	.	-	.	ID=Dca19679.1.exon5;Parent=Dca19679.1